Peer-reviewed
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J. Chae, R. Lim, T.L.P. Martin, C.-M. Ghim, P.-J. Kim
- "Enlightening the blind spot of the Michaelis–Menten rate law: The role of relaxation dynamics in molecular complex formation"
- J. Theor. Biol.
597, 111989 (2025).
R. Lim, T. L. P. Martin, J. Chae, W. Kim, H. Kim, C.-M. Ghim, P.-J. Kim
- "Generalized Michaelis–Menten rate law with time-varying molecular concentrations"
- PLOS Comp. Biol.
19 (12): e1011711 (2023).
JW Park, JU Kim, CM Ghim, CU Kim
- "The Boltzmann fair division for distributive justice"
- Sci. Rep.
12:16179 (2022).
W. Kim, W. Jeong, G. Jung, J. Jang, J. W. Lee, N. K. Kang, K. Baek, J. Shin, Y.-G. Lee, H. G. Koh, C. Kim, S. Yook, J. Chae, R. Lim, A. K. L. Cheung, H. Youn, Y.-S. Jin, P.-J. Kim, C.-M. Ghim
- "New genes decrease, but novel gene combinations inform biotechnology innovation"
- Preprint
M. Almukambetova, J. Jang, C.-M. Ghim, J. Jeong,
- "Birth and death of one-dimensional model domains in cylindrically confined liquid crystals"
- arXiv:
2203.09089 [cond-mat.soft] (2022).
J. Jang, C.-M. Ghim
- "Propagation of stochastic fluctuations in RNA polymerase abundance in constitutive gene expression"
- J. Kor. Phys. Soc.
80, 279 (2022)
J. Chae, R. Lim, C.-M. Ghim, P.-J. Kim
- "Backward Simulation for Inferring Hidden Biomolecular Kinetic Profiles"
- STAR Protocols
2, 100958 (2021)
J. Jang, F. Amblard, C.-M. Ghim
- "Heterogeneity is not always a source of noise: Stochastic gene expression in regulatory heterozygote"
- Phys. Rev. E
104, 044401 (2021)
R. Lim, J. Chae, D. E. Somers, C.-M. Ghim, P.-J. Kim
- "Cost-effective circadian mechanism: rhythmic degradation of circadian proteins spontaneously emerges without rhythmic post-translational regulation"
- iScience
24:102726 (2021)
J. K. Kim, C. Lee, S. W. Lim, A. Adhikari, J. T. Andring, R. McKenna, C.-M. Ghim, C. U. Kim
- "Elucidating the role of metal ions in carbonic anhydrase catalysis"
- Nat. Comm.
11: 4557 (2020)
R. Lim, J.J.T. Cabatbat, T.L.P. Martin, H. Kim, S. Kim, J. Sung, C.-M. Ghim, P.-J. Kim
- "Large-scale metabolic interaction network of the mouse and human gut microbiota"
- Scientific Data
7: 1 (2020)
H. Yang, J. Jang, C.-M. Ghim
- "Effects of zygosity on stochastic gene expression of diploid cells"
- J. Kor. Phys. Soc.
74: 312 (2019)
H. Im , C.-M. Ghim, R. J. Mitchell
- "Serum albumin and osmolality inhibit Bdellovibrio bacteriovorus predation in human serum"
- Sci. Rep.
7: 5896 (2017)
M. K. Sung, J. Jang, K. S. Lee, C.-M. Ghim, J. K. Choi
- "Selected heterozygosity at cis-regulatory sequences increases the expression homogeneity of a cell population in humans"
- Genome Biol.
17: 164 (2016)
N. Martyushenko, S. H. Johansen, C.-M. Ghim, E. Almaas
- "Hypothetical biomolecular probe based on a genetic switch with tunable symmetry and stability"
- BMC Sys. Biol.
10: 39 (2016).
H. Im, D. Kim, C.-M. Ghim, R. J. Mitchell
- "Shedding light on microbial predator–prey population dynamics using a quantitative bioluminescence assay."
- Microb. Ecol.
67: 167-176 (2014).
P. Vinuselvi, M. K. Kim, S. K. Lee, C.-M. Ghim
- "Rewiring carbon catabolite repression for microbial cell factory."
- BMB Reports
45: 59-70 (2012).
P. Vinuselvi, J. M. Park, J. M. Lee, K. Oh, C.-M. Ghim, S. K. Lee
- "Engineering microorganisms for biofuel production."
- Biofuels
2: 153-166 (2011).
R. J. Mitchell, S. K. Lee, T. Kim, C.-M. Ghim
- "Microbial linguistics: perspectives and applications of microbial cell-to-cell communication."
- BMB Reports
44: 1-10 (2011).
C.-M. Ghim, S. K. Lee, S. Takayama, R. J. Mitchell
- "The art of reporter proteins in science: past, present and future applications."
- BMB Reports
43: 451-460 (2010).
C.-M. Ghim, T. Kim, R. J. Mitchell, S. K. Lee
- "Synthetic biology for biofuels: Building designer microbes from the scratch."
- Biotech. Bioproc. Eng.
15: 11-21 (2010).
C.-M. Ghim, E. Almaas
- "Two-component genetic switch as a synthetic module with tunable stability."
- Phys. Rev. Lett.
103, 028101 (2009).
C. S. Wylie, C.-M. Ghim, D. Kessler, H. Levine
- "The fixation probability of rare mutators in finite asexual populations."
- Genetics
181: 1595-1612 (2009).
C.-M. Ghim, E. Almaas
- "Genetic noise control via protein oligomerization."
- BMC Sys. Biol.
2: 94 (2008).
C.-M. Ghim K.-I. Goh, B. Kahng
- "Lethality and synthetic lethality in the genome-wide metabolic network of Escherichia coli."
- J. Theo. Biol.
237: 401-407 (2005).
T. C. Kim, C.-M. Ghim*, H. J. Kim, D. H. Kim, D. Y. Noh, N. D. Kim, J. W. Chung, J. S. Yang, Y. J. Chang, T. W. Noh, B. Kahng, and J.-S. Kim* (*Corresponding)
- "Reply to the comment on kinetic roughening of ion-sputtered Pd(001) surface: Beyond the Kuramoto-Sivashinsky model"
- Phys. Rev. Lett.
94, 139602 (2005).
C.-M. Ghim, E. Oh, K.-I. Goh, B. Kahng, D. Kim
- "Packet transport along the shortest pathways in scale-free networks."
- Euro. Phys. J. B
38: 193-199 (2004).
T. C. Kim, C.-M. Ghim*, H. J. Kim, D. H. Kim, D. Y. Noh, N. D. Kim, J. W. Chung, J. S. Yang, Y. J. Chang, T. W. Noh, B. Kahng, and J.-S. Kim* (*Corresponding)
- "Kinetic roughening of ion-sputtered Pd(001) surface: Beyond the Kuramoto-Sivashinsky model."
- Phys. Rev. Lett.
92, 246104 (2004).
Cheol-Min Ghim and Jeong-Man Park
- "Morphology of fluctuating spherical vesicles with internal bond-orientational order."
- J. Phys.: Cond. Mat.
15: 3891-3907 (2003).
K.-I. Goh, C.-M. Ghim, B. Kahng, D. Kim
- "Reply to the comment on universal behavior of the load distribution."
- Phys. Rev. Lett.
91, 189804 (2003).
C.-M. Ghim and J.-M. Park
- "Physical model for the gating mechanism of ionic channels."
- Phys. Rev. E
66, 051910 (2002).
C.-M. Ghim and J.-M. Park
- "Orientational dependence of fluctuation-induced interactions in biological membranes."
- J. Kor. Phys. Soc.
40: 1077-1081 (2002).
Books & Chapters
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J.-M. Yang, C.-M. Ghim
- "Photoacoustic tomography opening new paradigms in biomedical imaging, Advanced Imaging Techniques and Related Methods for Convergence Science"
- Springer
2020
Cheol-Min Ghim,
- "Information Processing in Biochemical Reaction Networks"
(Springer, In Press)
- "Systems biology of microbial communities"
- Methods Mol. Biol.
500: 469-494 (2009).
- "Classes of shortest pathways structures in scale-free networks."
- Lecture Notes in Physics
650: 105–125 (2004).
Miscellaneous
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- "2024 노벨물리학상 해설강연 (Korean)"
- YTN Science
(2025).
C.-M. Ghim
- "혁신의 그늘 (Korean)"
- Veritas Alpha
April 11, 2023
J.-W. Park, J. U. Kim, C.-M. Ghim, and C. U. Kim
- "The Boltzmann method: a solution to divide limited resources fairly"
- LSE Business Review
(Feb. 9, 2023)
C.-M. Ghim,
- "이타성이 호모 사피엔스를 구원하리라 (Korean)"
- Horizon
(2021)
C.-M. Ghim,
- "천성과 양육, 운수소관과 인과율 (Korean)"
- Horizon
(2020)
C.-M. Ghim,
- "The KIAS-APCTP Winter School on Statistical Physics: 16 Years of Education"
- AAPPS Belletin
29, 52 (2019)
조정효 & 김철민,
- "세포 내 생체회로의 “설계” 원리"
- 물리학과 첨단기술
October (2016)
[Media Coverage: May 2015]
- "슈퍼박테리아 제압연구 (Korean)"
- "Scale-free networks in contemporary biology."
- Biomed. Comp. Rev.
3: 31 (2008).